STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB81872.1Pimeloyl-ACP methyl ester carboxylesterase. (279 aa)    
Predicted Functional Partners:
SDB90290.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.738
SDB80413.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
  0.698
SDB81866.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
       0.566
SDB86691.1
3,4-dihydroxy-9,10-secoandrosta-1,3, 5(10)-triene-9,17-dione 4,5-dioxygenase.
  
 
  0.542
SDB80316.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.533
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.518
SDB90691.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.515
SDB80617.1
Acyl carrier protein.
    
  0.513
SDB81930.1
Acyl-CoA dehydrogenase.
  
   0.491
SDB86716.1
Acyl-CoA dehydrogenase.
  
   0.491
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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