STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB81990.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (434 aa)    
Predicted Functional Partners:
SDB90290.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.852
SDB80413.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.813
SDB80228.1
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase.
 
 
 0.789
SDB82002.1
3-hydroxyacyl-CoA dehydrogenase.
  
    0.782
SDB81996.1
Opine dehydrogenase.
       0.775
SDB81930.1
Acyl-CoA dehydrogenase.
 
  
 0.748
SDB86716.1
Acyl-CoA dehydrogenase.
 
  
 0.738
SDB90285.1
NADPH-dependent glutamate synthase beta chain.
  
 
  0.722
SDB80048.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
  
  0.720
SDB96274.1
Cytochrome P450.
 
 
 0.711
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.