STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB84629.1Alpha-1,2-mannosyltransferase. (414 aa)    
Predicted Functional Partners:
SDB84614.1
Glyoxylase, beta-lactamase superfamily II.
 
    0.814
SDB84619.1
S-(hydroxymethyl)mycothiol dehydrogenase.
 
     0.802
SDB91707.1
Hypothetical protein.
    
 
 0.794
SDB93653.1
TIGR02677 family protein.
    
 
 0.794
SDB84633.1
Phosphoglycerate dehydrogenase.
       0.779
hisF
Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
       0.773
SDB80927.1
Hypothetical protein.
  
     0.771
SDB84648.1
ATP-dependent RNA helicase HelY.
       0.768
SDB89106.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
     0.758
SDB85911.1
Bacteriocin biosynthesis cyclodehydratase domain-containing protein.
  
     0.660
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.