STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB85867.1Predicted Zn-dependent peptidase. (459 aa)    
Predicted Functional Partners:
SDB85859.1
Predicted Zn-dependent peptidase.
     0.995
SDB80711.1
NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 
 0.969
SDB80120.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
    
 0.963
SDB80710.1
NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
   
 
 0.963
SDB92446.1
Ubiquinol-cytochrome c reductase cytochrome b subunit.
    
 0.963
SDB80712.1
NADH dehydrogenase subunit E.
   
 
 0.956
SDB79893.1
Glycine/D-amino acid oxidase.
   
 0.954
SDB97339.1
Glycine/D-amino acid oxidase.
   
 0.954
SDB80121.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
   
 0.952
SDB83143.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
   
 0.952
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.