STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB86112.1Methylamine utilisation protein MauE. (336 aa)    
Predicted Functional Partners:
SDB86108.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
       0.723
SDB79859.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.710
SDB86089.1
Sporulation and spore germination.
       0.506
SDB86093.1
Signal transduction histidine kinase.
       0.506
SDB86099.1
Two-component system, OmpR family, response regulator MtrA.
       0.506
SDB79867.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.408
SDB79863.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.403
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.