STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB86305.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
SDB86298.1
Hypothetical protein.
       0.789
SDB91148.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.757
SDB86311.1
Thioesterase superfamily protein.
       0.689
SDB96563.1
Hypothetical protein.
  
     0.632
SDB86318.1
Radical SAM protein, BA_1875 family.
  
    0.622
SDB91295.1
FMN adenylyltransferase /riboflavin kinase; Belongs to the ribF family.
   
 0.610
SDB80373.1
FMN reductase.
    
  0.554
SDB86285.1
Protein of unknown function DUF58.
       0.552
SDB86279.1
Ca-activated chloride channel family protein.
       0.551
SDB86273.1
Ca-activated chloride channel family protein.
       0.550
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.