STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB86420.1Uncharacterized conserved protein GlcG, DUF336 family. (142 aa)    
Predicted Functional Partners:
SDB86413.1
DNA-binding transcriptional regulator, IclR family.
       0.773
SDB85555.1
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     0.696
SDB86427.1
Catechol 2,3-dioxygenase.
 
     0.611
SDB86390.1
4-oxalocrotonate tautomerase.
       0.580
SDB86399.1
4-oxalocrotonate decarboxylase.
       0.573
SDB86409.1
2-keto-4-pentenoate hydratase.
       0.573
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
  
 0.480
SDB86385.1
2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.461
SDB80546.1
cob(I)yrinic acid a,c-diamide adenosyltransferase.
     
 0.434
SDB86431.1
CDP-4-dehydro-6-deoxyglucose reductase/phenol hydroxylase P5 protein.
       0.402
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.