STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB86716.1Acyl-CoA dehydrogenase. (399 aa)    
Predicted Functional Partners:
SDB90290.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.895
SDB80413.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.867
SDB86691.1
3,4-dihydroxy-9,10-secoandrosta-1,3, 5(10)-triene-9,17-dione 4,5-dioxygenase.
  
 
 0.864
SDB80588.1
Biphenyl-2,3-diol 1,2-dioxygenase.
  
 
 0.862
SDB80718.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.841
SDB80316.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.790
SDB80652.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 0.788
SDB80642.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.780
SDB90570.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.780
SDB80656.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.776
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.