STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB89746.1P-hydroxybenzoate 3-monooxygenase. (429 aa)    
Predicted Functional Partners:
SDB89758.1
Protocatechuate 4,5-dioxygenase, beta chain.
 
  
  0.917
SDB96274.1
Cytochrome P450.
 
 0.838
SDB89766.1
Aminocarboxymuconate-semialdehyde decarboxylase.
  
    0.790
SDB89754.1
Hypothetical protein.
       0.773
SDB81043.1
4-hydroxyphenylpyruvate dioxygenase.
 
 
 0.759
SDB87949.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.633
SDC01550.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
 0.573
SDB88019.1
3-oxoadipate enol-lactonase.
  
 
  0.569
SDB80228.1
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase.
  
 
 0.532
SDB89738.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.521
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.