STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB92325.1FAD/FMN-containing dehydrogenase. (460 aa)    
Predicted Functional Partners:
SDB90290.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.890
SDB80413.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.862
SDB85255.1
Glutamate synthase (NADH) large subunit.
    
 0.760
SDB89136.1
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
    
 0.696
SDB80321.1
Uncharacterized protein.
    
  0.645
SDB92315.1
Alanine racemase.
       0.628
SDB93515.1
Mo-co oxidoreductase dimerisation domain-containing protein.
  
 
   0.570
SDB92331.1
Lipid II:glycine glycyltransferase (Peptidoglycan interpeptide bridge formation enzyme).
       0.550
SDB80228.1
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase.
  
 0.522
SDB80486.1
Phenol hydroxylase P5 protein.
    
  0.473
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.