STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB97738.1Acetyltransferase (GNAT) family protein. (203 aa)    
Predicted Functional Partners:
SDB97758.1
Hypothetical protein.
       0.757
SDB85563.1
Protein of unknown function.
  
     0.704
SDB97670.1
Integral membrane protein.
 
     0.650
ddl-2
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
     0.649
SDB97721.1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
       0.639
SDB89026.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
  
   
 0.635
SDB81062.1
Hypothetical protein.
  
     0.628
SDB79818.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
     0.573
SDB88785.1
Protein of unknown function.
  
     0.556
SDB79989.1
N-Dimethylarginine dimethylaminohydrolase.
  
     0.530
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.