STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC09479.1Monosaccharide ABC transporter ATP-binding protein, CUT2 family. (512 aa)    
Predicted Functional Partners:
SDB81815.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.982
SDC09417.1
Ribose transport system permease protein/rhamnose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.969
SDB96466.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.956
SDC09449.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.947
SDB81820.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.926
SDB96493.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.922
SDB86188.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.918
SDC10758.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.775
SDC09506.1
Hypothetical protein.
       0.773
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.768
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.