STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001449115_01856Unannotated protein. (136 aa)    
Predicted Functional Partners:
GCA_001449115_01857
Unannotated protein.
 
   0.974
GCA_001449115_01830
Unannotated protein.
  
   0.895
GCA_001449115_03122
Unannotated protein.
  
     0.707
GCA_001449115_02177
Unannotated protein.
  
     0.603
GCA_001449115_03808
Unannotated protein.
  
     0.584
GCA_001449115_01854
Unannotated protein.
       0.523
GCA_001449115_01855
Unannotated protein.
       0.523
GCA_001449115_01069
Unannotated protein.
  
     0.479
GCA_001449115_03616
Unannotated protein.
  
     0.479
GCA_001449115_00080
Unannotated protein.
  
     0.474
Your Current Organism:
Terracidiphilus gabretensis
NCBI taxonomy Id: 1577687
Other names: Acidobacteriaceae bacterium S55, CECT 8791, NBRC 111238, T. gabretensis, Terracidiphilus gabretensis Garcia-Fraile et al. 2016, strain S55
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.