Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIZ31748.1 | AIZ32804.1 | NJ69_01370 | NJ69_07230 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
| AIZ31748.1 | AIZ33004.1 | NJ69_01370 | NJ69_08370 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.455 |
| AIZ31748.1 | AIZ33115.1 | NJ69_01370 | NJ69_09050 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.785 |
| AIZ31748.1 | AIZ33272.1 | NJ69_01370 | NJ69_09900 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.533 |
| AIZ31748.1 | AIZ35220.1 | NJ69_01370 | NJ69_20555 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.512 |
| AIZ31748.1 | AIZ35307.1 | NJ69_01370 | NJ69_21055 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
| AIZ31748.1 | AIZ35641.1 | NJ69_01370 | NJ69_14175 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.533 |
| AIZ31851.1 | AIZ32804.1 | NJ69_01910 | NJ69_07230 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| AIZ31851.1 | AIZ33004.1 | NJ69_01910 | NJ69_08370 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.953 |
| AIZ31851.1 | AIZ33115.1 | NJ69_01910 | NJ69_09050 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
| AIZ31851.1 | AIZ33272.1 | NJ69_01910 | NJ69_09900 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.918 |
| AIZ31851.1 | AIZ33450.1 | NJ69_01910 | NJ69_10860 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
| AIZ31851.1 | AIZ35307.1 | NJ69_01910 | NJ69_21055 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.654 |
| AIZ31851.1 | AIZ35641.1 | NJ69_01910 | NJ69_14175 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.918 |
| AIZ31851.1 | AIZ35711.1 | NJ69_01910 | NJ69_20905 | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.843 |
| AIZ32804.1 | AIZ31748.1 | NJ69_07230 | NJ69_01370 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.483 |
| AIZ32804.1 | AIZ31851.1 | NJ69_07230 | NJ69_01910 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| AIZ32804.1 | AIZ33004.1 | NJ69_07230 | NJ69_08370 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.979 |
| AIZ32804.1 | AIZ33115.1 | NJ69_07230 | NJ69_09050 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.686 |
| AIZ32804.1 | AIZ33272.1 | NJ69_07230 | NJ69_09900 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
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