STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flhFPositive regulator of class III flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)    
Predicted Functional Partners:
AIZ33450.1
Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.985
AIZ33468.1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.971
AIZ33457.1
Flagellar assembly protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
AIZ33459.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.965
AIZ33488.1
Flagellar rod assembly protein FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.952
fliE
Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.947
AIZ32804.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.946
AIZ33467.1
Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.937
AIZ33469.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.933
Your Current Organism:
Pseudomonas parafulva
NCBI taxonomy Id: 157782
Other names: AJ 2129, CIP 107617, DSM 17004, IFO 16636, JCM 11244, NBRC 16636, NRIC 0501, P. parafulva, Pseudomonas parafulva Uchino et al. 2002, strain CB-1
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