STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIZ34213.1Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (943 aa)    
Predicted Functional Partners:
AIZ34214.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.961
AIZ34215.1
Abortive phage infection protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.959
AIZ34212.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.949
AIZ34211.1
Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.941
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
  
 0.871
AIZ34497.1
Diadenosine tetraphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.810
AIZ33122.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.771
AIZ33572.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.771
AIZ33720.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.771
AIZ35180.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.771
Your Current Organism:
Pseudomonas parafulva
NCBI taxonomy Id: 157782
Other names: AJ 2129, CIP 107617, DSM 17004, IFO 16636, JCM 11244, NBRC 16636, NRIC 0501, P. parafulva, Pseudomonas parafulva Uchino et al. 2002, strain CB-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.