STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHT88175.1Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (52 aa)    
Predicted Functional Partners:
OHT88321.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.783
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.698
OHT88434.1
Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.655
OHT88174.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.621
OHT88173.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
     
 0.548
Your Current Organism:
Mycobacteroides saopaulense
NCBI taxonomy Id: 1578165
Other names: CCUG 66554, INCQS 0733, LMG 28586, LMG:28586, M. saopaulense, Mycobacterium saopaulense, Mycobacterium saopaulense Nogueira et al. 2015, Mycobacterium sp. EPM10695, Mycobacterium sp. EPM10906, Mycobacterium sp. IAL 3785, Mycobacterium sp. JAN1, Mycobacterium sp. JAN2, Mycobacteroides saopaulense (Nogueira et al. 2015) Gupta et al. 2018, strain EPM 10906
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.