STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQL53188.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)    
Predicted Functional Partners:
KQL51387.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
KQL54740.1
Sporulation integral membrane protein YlbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
KQL51050.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.719
KQL53187.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.712
KQL54960.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
gpr
Peptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.700
KQL54558.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.699
KQL53581.1
Stage III sporulation protein AH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
KQL55429.1
Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.680
KQL51151.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
Your Current Organism:
Bacillus shackletonii
NCBI taxonomy Id: 157838
Other names: B. shackletonii, Bacillus shackletonii Logan et al. 2004, CIP 107762, LMG 18435, LMG:18435, bacterium LMG 18435, strain Logan B1724, strain SSI024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.