STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQL53825.1Sodium:pantothenate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)    
Predicted Functional Partners:
panF
Sodium/pantothenate symporter; Mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.962
KQL53824.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.635
KQL55073.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
KQL54088.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.411
KQL51418.1
Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.410
Your Current Organism:
Bacillus shackletonii
NCBI taxonomy Id: 157838
Other names: B. shackletonii, Bacillus shackletonii Logan et al. 2004, CIP 107762, LMG 18435, LMG:18435, bacterium LMG 18435, strain Logan B1724, strain SSI024
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