STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQL54011.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)    
Predicted Functional Partners:
KQL51262.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.547
KQL52645.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.518
KQL52765.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.518
KQL54137.1
NADH-flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.518
KQL54010.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
KQL53835.1
tRNA 2-selenouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.479
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
     0.454
KQL55131.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.438
KQL50642.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.433
KQL54009.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.423
Your Current Organism:
Bacillus shackletonii
NCBI taxonomy Id: 157838
Other names: B. shackletonii, Bacillus shackletonii Logan et al. 2004, CIP 107762, LMG 18435, LMG:18435, bacterium LMG 18435, strain Logan B1724, strain SSI024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.