STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQL54041.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (370 aa)    
Predicted Functional Partners:
murJ
Hypothetical protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.797
KQL54042.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.777
KQL54043.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
KQL54044.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
KQL54045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
KQL54039.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
KQL54038.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.672
KQL54046.1
Pyridoxal phosphate-dependent aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
       0.593
KQL54047.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.503
KQL54048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
Your Current Organism:
Bacillus shackletonii
NCBI taxonomy Id: 157838
Other names: B. shackletonii, Bacillus shackletonii Logan et al. 2004, CIP 107762, LMG 18435, LMG:18435, bacterium LMG 18435, strain Logan B1724, strain SSI024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.