STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ32099.1Two component transcriptional regulator, LuxR family. (214 aa)    
Predicted Functional Partners:
SDQ32072.1
PAS/PAC sensor signal transduction histidine kinase /multi-sensor signal transduction histidine kinase.
 
 0.979
SDR61192.1
PAS domain S-box-containing protein.
 
 0.947
SDR59482.1
PAS domain S-box-containing protein.
   
 0.930
SDR55415.1
PAS domain S-box-containing protein.
 
 0.923
SDR56320.1
Multi-sensor hybrid histidine kinase.
   
 0.907
SDR24026.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.906
SDR60476.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.829
SDR53794.1
Two-component system, LuxR family, sensor kinase FixL.
 
 0.823
SDR56512.1
Signal transduction histidine kinase.
 
 0.815
SDR25722.1
PAS/PAC sensor hybrid histidine kinase.
 
 0.785
Your Current Organism:
Paraburkholderia tuberum
NCBI taxonomy Id: 157910
Other names: Burkholderia sp. WSM4174, Burkholderia sp. WSM4175, Burkholderia sp. WSM4176, Burkholderia sp. WSM4177, Burkholderia sp. WSM4179, Burkholderia sp. WSM4180, Burkholderia tuberum, Burkholderia tuberum Vandamme et al. 2003, CCUG 47178, CIP 108238, DSM 18489, LMG 21444, LMG:21444, P. tuberum, Paraburkholderia tuberum (Vandamme et al. 2003) Sawana et al. 2015, strain STM678
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