STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ88697.1Amino acid ABC transporter membrane protein 2, PAAT family. (214 aa)    
Predicted Functional Partners:
SDQ88735.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.997
SDQ88661.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  
 
0.993
SDR62682.1
Polar amino acid transport system substrate-binding protein/glutamine transport system substrate-binding protein.
 
  0.982
SDQ88628.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  0.980
SDR61218.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.977
SDR43303.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.952
SDR59534.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.934
SDQ56755.1
L-glutamate ABC transporter ATP-binding protein.
 0.933
SDR62678.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.933
SDR50996.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.932
Your Current Organism:
Paraburkholderia tuberum
NCBI taxonomy Id: 157910
Other names: Burkholderia sp. WSM4174, Burkholderia sp. WSM4175, Burkholderia sp. WSM4176, Burkholderia sp. WSM4177, Burkholderia sp. WSM4179, Burkholderia sp. WSM4180, Burkholderia tuberum, Burkholderia tuberum Vandamme et al. 2003, CCUG 47178, CIP 108238, DSM 18489, LMG 21444, LMG:21444, P. tuberum, Paraburkholderia tuberum (Vandamme et al. 2003) Sawana et al. 2015, strain STM678
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