STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR20391.1acetyl-CoA acetyltransferase /3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)    
Predicted Functional Partners:
SDQ88036.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.997
SDQ35076.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.996
SDR21413.1
Short chain enoyl-CoA hydratase.
 
 0.996
SDR45058.1
Short chain enoyl-CoA hydratase.
 0.996
SDR53105.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.995
SDR53236.1
Hypothetical protein.
  
 0.972
SDR51799.1
3-hydroxyacyl-CoA dehydrogenase.
  0.935
SDR62229.1
3-hydroxyacyl-CoA dehydrogenase.
 0.897
SDR60098.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.895
SDR62574.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.872
Your Current Organism:
Paraburkholderia tuberum
NCBI taxonomy Id: 157910
Other names: Burkholderia sp. WSM4174, Burkholderia sp. WSM4175, Burkholderia sp. WSM4176, Burkholderia sp. WSM4177, Burkholderia sp. WSM4179, Burkholderia sp. WSM4180, Burkholderia tuberum, Burkholderia tuberum Vandamme et al. 2003, CCUG 47178, CIP 108238, DSM 18489, LMG 21444, LMG:21444, P. tuberum, Paraburkholderia tuberum (Vandamme et al. 2003) Sawana et al. 2015, strain STM678
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