STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR43303.1Amino acid ABC transporter ATP-binding protein, PAAT family. (295 aa)    
Predicted Functional Partners:
SDR43295.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.999
SDR43288.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.998
SDR43281.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  0.995
SDR62680.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.991
SDQ56795.1
L-glutamate ABC transporter membrane protein.
 0.963
SDR61214.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.961
SDR50991.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.960
SDR16213.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.959
SDR59530.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.959
SDQ88661.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.952
Your Current Organism:
Paraburkholderia tuberum
NCBI taxonomy Id: 157910
Other names: Burkholderia sp. WSM4174, Burkholderia sp. WSM4175, Burkholderia sp. WSM4176, Burkholderia sp. WSM4177, Burkholderia sp. WSM4179, Burkholderia sp. WSM4180, Burkholderia tuberum, Burkholderia tuberum Vandamme et al. 2003, CCUG 47178, CIP 108238, DSM 18489, LMG 21444, LMG:21444, P. tuberum, Paraburkholderia tuberum (Vandamme et al. 2003) Sawana et al. 2015, strain STM678
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