STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR44377.1Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. (458 aa)    
Predicted Functional Partners:
SDR44382.1
Two component transcriptional regulator, winged helix family.
 
 0.997
SDQ64210.1
Two component transcriptional regulator, winged helix family.
 
  0.987
SDQ64288.1
Two component transcriptional regulator, winged helix family.
  
 0.986
SDR20933.1
Two component transcriptional regulator, winged helix family.
 
 0.986
SDR61192.1
PAS domain S-box-containing protein.
 
 
 0.983
SDQ31991.1
Dihydrolipoamide dehydrogenase.
    
 0.974
SDR00531.1
Two component transcriptional regulator, winged helix family.
  
 0.972
SDR11682.1
Two-component system, OmpR family, phosphate regulon response regulator OmpR.
  
 0.972
SDR56320.1
Multi-sensor hybrid histidine kinase.
 
 0.969
SDR59482.1
PAS domain S-box-containing protein.
 
 
0.955
Your Current Organism:
Paraburkholderia tuberum
NCBI taxonomy Id: 157910
Other names: Burkholderia sp. WSM4174, Burkholderia sp. WSM4175, Burkholderia sp. WSM4176, Burkholderia sp. WSM4177, Burkholderia sp. WSM4179, Burkholderia sp. WSM4180, Burkholderia tuberum, Burkholderia tuberum Vandamme et al. 2003, CCUG 47178, CIP 108238, DSM 18489, LMG 21444, LMG:21444, P. tuberum, Paraburkholderia tuberum (Vandamme et al. 2003) Sawana et al. 2015, strain STM678
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