Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ54406.1 | SDR49313.1 | SAMN05445850_0940 | SAMN05445850_4838 | Integral membrane protein, YjbE family. | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | 0.402 |
SDR47597.1 | SDR49313.1 | SAMN05445850_4574 | SAMN05445850_4838 | Membrane protein TerC, possibly involved in tellurium resistance. | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | 0.623 |
SDR49303.1 | SDR49308.1 | SAMN05445850_4836 | SAMN05445850_4837 | Hypothetical protein. | Protein of unknown function. | 0.955 |
SDR49303.1 | SDR49313.1 | SAMN05445850_4836 | SAMN05445850_4838 | Hypothetical protein. | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | 0.929 |
SDR49303.1 | SDR49320.1 | SAMN05445850_4836 | SAMN05445850_4839 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.496 |
SDR49308.1 | SDR49303.1 | SAMN05445850_4837 | SAMN05445850_4836 | Protein of unknown function. | Hypothetical protein. | 0.955 |
SDR49308.1 | SDR49313.1 | SAMN05445850_4837 | SAMN05445850_4838 | Protein of unknown function. | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | 0.932 |
SDR49308.1 | SDR49320.1 | SAMN05445850_4837 | SAMN05445850_4839 | Protein of unknown function. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.496 |
SDR49313.1 | SDQ54406.1 | SAMN05445850_4838 | SAMN05445850_0940 | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | Integral membrane protein, YjbE family. | 0.402 |
SDR49313.1 | SDR47597.1 | SAMN05445850_4838 | SAMN05445850_4574 | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | Membrane protein TerC, possibly involved in tellurium resistance. | 0.623 |
SDR49313.1 | SDR49303.1 | SAMN05445850_4838 | SAMN05445850_4836 | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | Hypothetical protein. | 0.929 |
SDR49313.1 | SDR49308.1 | SAMN05445850_4838 | SAMN05445850_4837 | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | Protein of unknown function. | 0.932 |
SDR49313.1 | SDR49320.1 | SAMN05445850_4838 | SAMN05445850_4839 | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.632 |
SDR49320.1 | SDR49303.1 | SAMN05445850_4839 | SAMN05445850_4836 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.496 |
SDR49320.1 | SDR49308.1 | SAMN05445850_4839 | SAMN05445850_4837 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Protein of unknown function. | 0.496 |
SDR49320.1 | SDR49313.1 | SAMN05445850_4839 | SAMN05445850_4838 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family. | 0.632 |