Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ46743.1 | SDR22018.1 | SAMN05445850_0721 | SAMN05445850_3373 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.773 |
SDQ46743.1 | SDR51417.1 | SAMN05445850_0721 | SAMN05445850_5258 | Hypothetical protein. | Initiator Replication protein. | 0.675 |
SDQ46743.1 | SDR60998.1 | SAMN05445850_0721 | SAMN05445850_7490 | Hypothetical protein. | Outer membrane protein (porin). | 0.739 |
SDR00311.1 | SDR44853.1 | SAMN05445850_2418 | SAMN05445850_4159 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.671 |
SDR00311.1 | SDR51162.1 | SAMN05445850_2418 | SAMN05445850_5207 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.650 |
SDR00311.1 | SDR51417.1 | SAMN05445850_2418 | SAMN05445850_5258 | Outer membrane protein (porin). | Initiator Replication protein. | 0.718 |
SDR00311.1 | SDR55632.1 | SAMN05445850_2418 | SAMN05445850_6127 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.672 |
SDR00311.1 | SDR58672.1 | SAMN05445850_2418 | SAMN05445850_6613 | Outer membrane protein (porin). | Hypothetical protein. | 0.730 |
SDR00311.1 | SDR60998.1 | SAMN05445850_2418 | SAMN05445850_7490 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.640 |
SDR00311.1 | SDR62674.1 | SAMN05445850_2418 | SAMN05445850_8348 | Outer membrane protein (porin). | Outer membrane protein OmpU. | 0.673 |
SDR22018.1 | SDQ46743.1 | SAMN05445850_3373 | SAMN05445850_0721 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.773 |
SDR22018.1 | SDR51162.1 | SAMN05445850_3373 | SAMN05445850_5207 | Glycosyltransferase involved in cell wall bisynthesis. | Outer membrane protein (porin). | 0.418 |
SDR22018.1 | SDR51417.1 | SAMN05445850_3373 | SAMN05445850_5258 | Glycosyltransferase involved in cell wall bisynthesis. | Initiator Replication protein. | 0.611 |
SDR22018.1 | SDR60998.1 | SAMN05445850_3373 | SAMN05445850_7490 | Glycosyltransferase involved in cell wall bisynthesis. | Outer membrane protein (porin). | 0.704 |
SDR44853.1 | SDR00311.1 | SAMN05445850_4159 | SAMN05445850_2418 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.671 |
SDR44853.1 | SDR51162.1 | SAMN05445850_4159 | SAMN05445850_5207 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.633 |
SDR44853.1 | SDR54567.1 | SAMN05445850_4159 | SAMN05445850_5903 | Outer membrane protein (porin). | O-antigen ligase. | 0.538 |
SDR44853.1 | SDR55632.1 | SAMN05445850_4159 | SAMN05445850_6127 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.614 |
SDR44853.1 | SDR58672.1 | SAMN05445850_4159 | SAMN05445850_6613 | Outer membrane protein (porin). | Hypothetical protein. | 0.743 |
SDR44853.1 | SDR60998.1 | SAMN05445850_4159 | SAMN05445850_7490 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.859 |
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