STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR61324.1Hypothetical protein; Manually curated. (77 aa)    
Predicted Functional Partners:
SDR56745.1
Hypothetical protein.
   
 
  0.600
SDR23108.1
Phosphate butyryltransferase.
  
 
 0.571
SDR23478.1
Phosphate acetyltransferase.
  
 
 0.571
SDQ35076.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.497
SDQ88036.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.497
SDR21413.1
Short chain enoyl-CoA hydratase.
     
 0.497
SDR45058.1
Short chain enoyl-CoA hydratase.
     
 0.497
SDR53105.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.497
SDR61327.1
Aldehyde dehydrogenase (NAD+).
       0.421
Your Current Organism:
Paraburkholderia tuberum
NCBI taxonomy Id: 157910
Other names: Burkholderia sp. WSM4174, Burkholderia sp. WSM4175, Burkholderia sp. WSM4176, Burkholderia sp. WSM4177, Burkholderia sp. WSM4179, Burkholderia sp. WSM4180, Burkholderia tuberum, Burkholderia tuberum Vandamme et al. 2003, CCUG 47178, CIP 108238, DSM 18489, LMG 21444, LMG:21444, P. tuberum, Paraburkholderia tuberum (Vandamme et al. 2003) Sawana et al. 2015, strain STM678
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.