Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ72471.1 | SDR59580.1 | SAMN05445850_1545 | SAMN05445850_6886 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 5-oxoprolinase (ATP-hydrolysing). | 0.924 |
SDQ72471.1 | SDR61457.1 | SAMN05445850_1545 | SAMN05445850_7765 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | N-methylhydantoinase B. | 0.841 |
SDQ72471.1 | SDR61458.1 | SAMN05445850_1545 | SAMN05445850_7766 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | N-methylhydantoinase A. | 0.845 |
SDQ72471.1 | SDR61459.1 | SAMN05445850_1545 | SAMN05445850_7767 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Purine-cytosine permease. | 0.553 |
SDQ72471.1 | amiE | SAMN05445850_1545 | SAMN05445850_2873 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Amidase; Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates. | 0.829 |
SDQ72471.1 | nadE | SAMN05445850_1545 | SAMN05445850_2416 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.867 |
SDR44228.1 | SDR59580.1 | SAMN05445850_4056 | SAMN05445850_6886 | Nicotinamidase-related amidase. | 5-oxoprolinase (ATP-hydrolysing). | 0.784 |
SDR44228.1 | SDR61457.1 | SAMN05445850_4056 | SAMN05445850_7765 | Nicotinamidase-related amidase. | N-methylhydantoinase B. | 0.622 |
SDR44228.1 | SDR61458.1 | SAMN05445850_4056 | SAMN05445850_7766 | Nicotinamidase-related amidase. | N-methylhydantoinase A. | 0.524 |
SDR44228.1 | nadE | SAMN05445850_4056 | SAMN05445850_2416 | Nicotinamidase-related amidase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.462 |
SDR50163.1 | SDR59580.1 | SAMN05445850_5005 | SAMN05445850_6886 | Nicotinamidase-related amidase. | 5-oxoprolinase (ATP-hydrolysing). | 0.784 |
SDR50163.1 | SDR61457.1 | SAMN05445850_5005 | SAMN05445850_7765 | Nicotinamidase-related amidase. | N-methylhydantoinase B. | 0.622 |
SDR50163.1 | SDR61458.1 | SAMN05445850_5005 | SAMN05445850_7766 | Nicotinamidase-related amidase. | N-methylhydantoinase A. | 0.524 |
SDR50163.1 | nadE | SAMN05445850_5005 | SAMN05445850_2416 | Nicotinamidase-related amidase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.462 |
SDR59580.1 | SDQ72471.1 | SAMN05445850_6886 | SAMN05445850_1545 | 5-oxoprolinase (ATP-hydrolysing). | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.924 |
SDR59580.1 | SDR44228.1 | SAMN05445850_6886 | SAMN05445850_4056 | 5-oxoprolinase (ATP-hydrolysing). | Nicotinamidase-related amidase. | 0.784 |
SDR59580.1 | SDR50163.1 | SAMN05445850_6886 | SAMN05445850_5005 | 5-oxoprolinase (ATP-hydrolysing). | Nicotinamidase-related amidase. | 0.784 |
SDR59580.1 | SDR61457.1 | SAMN05445850_6886 | SAMN05445850_7765 | 5-oxoprolinase (ATP-hydrolysing). | N-methylhydantoinase B. | 0.986 |
SDR59580.1 | SDR61458.1 | SAMN05445850_6886 | SAMN05445850_7766 | 5-oxoprolinase (ATP-hydrolysing). | N-methylhydantoinase A. | 0.985 |
SDR59580.1 | amiE | SAMN05445850_6886 | SAMN05445850_2873 | 5-oxoprolinase (ATP-hydrolysing). | Amidase; Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates. | 0.790 |
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