Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ62889.1 | SDR62511.1 | SAMN05445850_1225 | SAMN05445850_8234 | Methylase of polypeptide chain release factors; Belongs to the methyltransferase superfamily. | NHLP leader peptide domain-containing protein. | 0.919 |
SDR62511.1 | SDQ62889.1 | SAMN05445850_8234 | SAMN05445850_1225 | NHLP leader peptide domain-containing protein. | Methylase of polypeptide chain release factors; Belongs to the methyltransferase superfamily. | 0.919 |
SDR62511.1 | SDR62513.1 | SAMN05445850_8234 | SAMN05445850_8235 | NHLP leader peptide domain-containing protein. | Radical SAM family RiPP maturation amino acid epimerase. | 0.521 |
SDR62511.1 | SDR62514.1 | SAMN05445850_8234 | SAMN05445850_8236 | NHLP leader peptide domain-containing protein. | Ribosomal peptide maturation radical SAM protein 1. | 0.499 |
SDR62511.1 | SDR62515.1 | SAMN05445850_8234 | SAMN05445850_8237 | NHLP leader peptide domain-containing protein. | Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase. | 0.499 |
SDR62511.1 | prmB | SAMN05445850_8234 | SAMN05445850_0087 | NHLP leader peptide domain-containing protein. | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily. | 0.919 |
SDR62511.1 | prmC | SAMN05445850_8234 | SAMN05445850_1208 | NHLP leader peptide domain-containing protein. | [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.919 |
SDR62513.1 | SDR62511.1 | SAMN05445850_8235 | SAMN05445850_8234 | Radical SAM family RiPP maturation amino acid epimerase. | NHLP leader peptide domain-containing protein. | 0.521 |
SDR62513.1 | SDR62514.1 | SAMN05445850_8235 | SAMN05445850_8236 | Radical SAM family RiPP maturation amino acid epimerase. | Ribosomal peptide maturation radical SAM protein 1. | 0.773 |
SDR62513.1 | SDR62515.1 | SAMN05445850_8235 | SAMN05445850_8237 | Radical SAM family RiPP maturation amino acid epimerase. | Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase. | 0.773 |
SDR62514.1 | SDR62511.1 | SAMN05445850_8236 | SAMN05445850_8234 | Ribosomal peptide maturation radical SAM protein 1. | NHLP leader peptide domain-containing protein. | 0.499 |
SDR62514.1 | SDR62513.1 | SAMN05445850_8236 | SAMN05445850_8235 | Ribosomal peptide maturation radical SAM protein 1. | Radical SAM family RiPP maturation amino acid epimerase. | 0.773 |
SDR62514.1 | SDR62515.1 | SAMN05445850_8236 | SAMN05445850_8237 | Ribosomal peptide maturation radical SAM protein 1. | Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase. | 0.796 |
SDR62515.1 | SDR62511.1 | SAMN05445850_8237 | SAMN05445850_8234 | Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase. | NHLP leader peptide domain-containing protein. | 0.499 |
SDR62515.1 | SDR62513.1 | SAMN05445850_8237 | SAMN05445850_8235 | Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase. | Radical SAM family RiPP maturation amino acid epimerase. | 0.773 |
SDR62515.1 | SDR62514.1 | SAMN05445850_8237 | SAMN05445850_8236 | Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase. | Ribosomal peptide maturation radical SAM protein 1. | 0.796 |
prmB | SDR62511.1 | SAMN05445850_0087 | SAMN05445850_8234 | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily. | NHLP leader peptide domain-containing protein. | 0.919 |
prmC | SDR62511.1 | SAMN05445850_1208 | SAMN05445850_8234 | [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | NHLP leader peptide domain-containing protein. | 0.919 |