STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO48295.150S ribosomal protein L3P, large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (316 aa)    
Predicted Functional Partners:
KHO48007.1
Small subunit ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
 
 
 0.999
rpl44e
Large subunit ribosomal protein L44e; Binds to the 23S rRNA.
 
 0.999
rpl10e
50S ribosomal protein L10e, large subunit ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.
 
 0.999
KHO48026.1
Small subunit ribosomal protein S2.
 
 
 0.999
KHO48034.1
Large subunit ribosomal protein L7Ae.
 
 0.999
KHO48035.1
Ribosomal protein S28E/S33.
   
 
 0.999
KHO48036.1
Large subunit ribosomal protein L24e.
   
 0.999
rps13
Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
rps4
Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
 
 0.999
rps11
30S ribosomal protein S11, small subunit ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
 
 
 0.999
Your Current Organism:
archaeon GW2011AR5
NCBI taxonomy Id: 1579367
Other names: a. GW2011_AR5, archaeon GW2011_AR5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.