STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS40491.1Hypothetical protein. (244 aa)    
Predicted Functional Partners:
WM2015_98
Hypothetical protein.
       0.773
WM2015_99
ECF subfamily RNA polymerase sigma-24 factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
       0.773
WM2015_95
Peptide ABC transporter permease; Pfam:pfam12704 MacB-like periplasmic core domain.
       0.522
WM2015_96
ABC-type antimicrobial peptide transport system, ATPase component; Pfam:pfam00005 ABC transporter.
       0.522
WM2015_97
RND family efflux transporter MFP subunit; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.522
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.