STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41379.1Putative AcrB/AcrD/AcrF family protein precursor; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1004 aa)    
Predicted Functional Partners:
AKS41380.1
Hypothetical protein; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.960
AKS42911.1
Hypothetical protein; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.806
AKS42055.1
RND family efflux transporter MFP subunit; Pfam:pfam00529 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.788
AKS40594.1
Hypothetical protein; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.781
AKS40832.1
Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.775
AKS41381.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
   
 0.758
AKS41313.1
AcrA; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.721
AKS41226.1
RND family efflux transporter, MFP subunit; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.704
AKS40715.1
Membrane protein; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.657
AKS41248.1
Putative Co/Zn/Cd efflux system membrane fusion protein; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.651
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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