STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srkAHypothetical protein; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. (339 aa)    
Predicted Functional Partners:
AKS41384.1
Hypothetical protein.
       0.579
AKS40746.1
CheA signal transduction histidine kinase; Pfam:pfam00072 Response regulator receiver domain.
  
  
 0.479
AKS42445.1
Pfam:pfam03872 Anti sigma-E protein RseA, N-terminal domain.
  
     0.461
AKS42455.1
Aspartate kinase; Pfam:pfam00742 Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
  
 0.447
AKS43095.1
Pfam:pfam04337 Protein of unknown function, DUF480; Belongs to the UPF0502 family.
 
     0.431
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.418
AKS42058.1
17 kDa surface antigen; Pfam:pfam05433 Glycine zipper 2TM domain.
  
     0.415
AKS43320.1
Hypothetical protein; Pfam:pfam05036 Sporulation related domain.
  
    0.415
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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