STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41394.1Pfam:pfam05684 Protein of unknown function (DUF819). (385 aa)    
Predicted Functional Partners:
AKS43271.1
Amidohydrolase; Pfam:pfam13594 Amidohydrolase.
  
     0.668
WM2015_68
Pfam:pfam04397 LytTr DNA-binding domain.
  
     0.632
AKS41392.1
Transcriptional regulator.
       0.631
AKS41393.1
Hypothetical protein.
       0.631
AKS42833.1
Amidohydrolase; Pfam:pfam13147 Amidohydrolase.
  
     0.606
AKS41252.1
Hypothetical protein.
  
     0.491
AKS41234.1
Xaa-Pro aminopeptidase; Pfam:pfam00557 Metallopeptidase family M24.
  
     0.483
AKS41391.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase; Pfam:pfam00326 Prolyl oligopeptidase family.
 
     0.471
AKS40845.1
Beta-lactamase; Pfam:pfam00144 Beta-lactamase.
  
     0.458
AKS43121.1
Pfam:pfam00246 Zinc carboxypeptidase.
  
     0.452
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.