STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41490.1Pfam:pfam04303 PrpF protein. (391 aa)    
Predicted Functional Partners:
AKS41489.1
2-methylcitrate dehydratase (Trans-methylaconitate-forming); Pfam:pfam00330 Aconitase family (aconitate hydratase).
 
 
 0.993
AKS41511.1
Pfam:pfam06434 Aconitate hydratase 2 N-terminus.
    
 0.914
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
  
 0.781
AKS41491.1
Hypothetical protein; Pfam:pfam13424 Tetratricopeptide repeat.
       0.664
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
 
   0.664
AKS41780.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
  
 0.648
AKS42132.1
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
 
  
 0.580
AKS40650.1
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.420
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.