STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41491.1Hypothetical protein; Pfam:pfam13424 Tetratricopeptide repeat. (742 aa)    
Predicted Functional Partners:
AKS41490.1
Pfam:pfam04303 PrpF protein.
       0.664
AKS43022.1
Hypothetical protein; Pfam:pfam00486 Transcriptional regulatory protein, C terminal.
  
    0.564
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.557
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  0.509
AKS41887.1
Molting fluid carboxypeptidase A, putative; Pfam:pfam00246 Zinc carboxypeptidase.
  
 
   0.504
AKS41719.1
Pfam:pfam12158 Protein of unknown function (DUF3592).
   
 0.487
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.484
WM2015_46
Hypothetical protein; Pfam:pfam00486 Transcriptional regulatory protein, C terminal.
  
    0.457
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.448
AKS40928.1
Pfam:pfam12695 Alpha/beta hydrolase family.
  
 
   0.448
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.