STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41524.1Pfam:pfam01663 Type I phosphodiesterase / nucleotide pyrophosphatase. (603 aa)    
Predicted Functional Partners:
AKS41528.1
Hypothetical protein; Pfam:pfam00884 Sulfatase.
 
     0.797
AKS41523.1
Hypothetical protein.
       0.774
AKS41269.1
Hypothetical protein.
  
     0.666
AKS40962.1
Hypothetical protein.
  
     0.659
AKS41532.1
ASPIC/UnbV domain protein; Pfam:pfam07593 ASPIC and UnbV.
  
     0.584
AKS41632.1
Hypothetical protein.
  
     0.572
AKS43307.1
ASPIC/UnbV domain protein; Pfam:pfam07593 ASPIC and UnbV.
  
     0.569
AKS42968.1
FG-GAP repeat protein; Pfam:pfam13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella.
  
     0.554
AKS42256.1
Hypothetical protein; Pfam:pfam00884 Sulfatase.
  
     0.552
AKS41552.1
Hypothetical protein; Pfam:pfam07593 ASPIC and UnbV.
  
     0.549
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.