STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41555.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
AKS41554.1
Abortive infection protein; Pfam:pfam02517 CAAX protease self-immunity.
 
    0.761
AKS41556.1
Short-chain fatty acid transporter; Pfam:pfam03606 C4-dicarboxylate anaerobic carrier.
 
     0.643
AKS41729.1
Type 12 methyltransferase; Pfam:pfam13489 Methyltransferase domain.
  
     0.561
WM2015_16
Pfam:pfam12847 Methyltransferase domain.
  
     0.546
AKS41337.1
Pfam:pfam00999 Sodium/hydrogen exchanger family.
  
     0.503
AKS42806.1
Hypothetical protein.
  
     0.481
AKS41395.1
Hypothetical protein.
  
     0.479
AKS41557.1
Cysteine desulfurase; Pfam:pfam00266 Aminotransferase class-V.
       0.431
AKS41083.1
Stem cell self-renewal protein Piwi domain-containing protein.
  
     0.430
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.