STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41606.1Cytochrome C; Pfam:pfam11845 Protein of unknown function (DUF3365). (190 aa)    
Predicted Functional Partners:
AKS41607.1
Sulfurtransferase; Pfam:pfam11127 Protein of unknown function (DUF2892).
 
     0.839
AKS41659.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
   
 0.568
AKS42932.1
Nitric oxide reductase large subunit; Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I.
  
  
 0.556
AKS43027.1
Hypothetical protein; Pfam:pfam13205 Bacterial Ig-like domain.
  
  
 0.538
AKS43273.1
Hypothetical protein; Pfam:pfam13205 Bacterial Ig-like domain.
  
  
 0.538
AKS41608.1
Hypothetical protein.
       0.535
AKS40586.1
TonB-dependent copper receptor; Pfam:pfam00593 TonB dependent receptor.
 
     0.534
AKS40660.1
Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.490
AKS41959.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
  
 0.441
AKS41605.1
Leucine dehydrogenase; Pfam:pfam02812 Glu/Leu/Phe/Val dehydrogenase, dimerization domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.419
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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