STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41611.1Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family. (256 aa)    
Predicted Functional Partners:
AKS41612.1
Hypothetical protein; Pfam:pfam12802 MarR family.
 
     0.804
AKS41405.1
Hypothetical protein; Pfam:pfam03007 Wax ester synthase-like Acyl-CoA acyltransferase domain.
 
     0.754
AKS43222.1
Pfam:pfam11017 Protein of unknown function (DUF2855).
  
     0.635
AKS43248.1
Putative Saccharopine dehydrogenase (NAD(+), L-glutamate-forming); Pfam:pfam03435 Saccharopine dehydrogenase.
  
     0.632
AKS42161.1
Short-chain dehydrogenase; Pfam:pfam07993 Male sterility protein.
  
     0.618
AKS41124.1
Permease; Pfam:pfam07819 PGAP1-like protein.
  
     0.605
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
    0.528
AKS42166.1
Hypothetical protein; Pfam:pfam03007 Wax ester synthase-like Acyl-CoA acyltransferase domain.
  
     0.524
AKS41613.1
Amino acid transporter; Pfam:pfam00854 POT family.
       0.488
AKS41586.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
     0.400
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.