STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS40525.1Permease; Pfam:pfam12704 MacB-like periplasmic core domain. (834 aa)    
Predicted Functional Partners:
AKS40526.1
ABC transporter-like protein; Pfam:pfam00005 ABC transporter.
 
 
 0.957
AKS40528.1
RND family efflux transporter MFP subunit; Pfam:pfam13437 HlyD family secretion protein.
 
  
 0.952
WM2015_96
ABC-type antimicrobial peptide transport system, ATPase component; Pfam:pfam00005 ABC transporter.
 
 
 0.827
WM2015_97
RND family efflux transporter MFP subunit; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.825
AKS40524.1
Permease; Pfam:pfam12704 MacB-like periplasmic core domain.
 
    
0.800
AKS41232.1
Hypothetical protein.
 
   
 0.709
AKS40523.1
Chemotaxis protein CheY; Pfam:pfam00158 Sigma-54 interaction domain.
 
     0.653
AKS40778.1
Hypothetical protein.
  
     0.630
lolD-2
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 
 0.621
AKS40715.1
Membrane protein; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.594
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.