STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41807.1Hypothetical protein; Pfam:pfam01694 Rhomboid family. (225 aa)    
Predicted Functional Partners:
AKS41806.1
Pfam:pfam01553 Acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
   
   0.777
AKS41805.1
Pfam:pfam00011 Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
       0.727
AKS41808.1
Hypothetical protein; Pfam:pfam10604 Polyketide cyclase / dehydrase and lipid transport.
       0.642
AKS41809.1
Hypothetical protein; Pfam:pfam10728 Domain of unknown function (DUF2520).
       0.642
AKS41423.1
Pfam:pfam01812 5-formyltetrahydrofolate cyclo-ligase family; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.520
tatA
Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.483
AKS40689.1
Hypothetical protein; Pfam:pfam02416 mttA/Hcf106 family.
   
 
 0.483
AKS41687.1
Protein hfq; Pfam:pfam01520 N-acetylmuramoyl-L-alanine amidase.
  
   0.481
AKS41692.1
HflK protein; HflC and HflK could encode or regulate a protease.
   
 0.466
AKS41693.1
Protein HflC; HflC and HflK could regulate a protease.
   
 0.466
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.