STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AKS42129.1HAD family hydrolase; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase. (220 aa)    
Predicted Functional Partners:
AKS42131.1
Aldolase; Pfam:pfam00682 HMGL-like.
 
     0.949
AKS42130.1
Pfam:pfam02348 Cytidylyltransferase.
 
     0.872
AKS42132.1
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
       0.583
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
  
    0.581
AKS42128.1
Hypothetical protein.
       0.559
AKS42136.1
Putative pterin-4-alpha-carbinolamine dehydratase; Pfam:pfam01329 Pterin 4 alpha carbinolamine dehydratase.
  
  
 0.530
AKS42134.1
Pfam:pfam01266 FAD dependent oxidoreductase.
       0.471
AKS42979.1
Malic enzyme; Pfam:pfam01515 Phosphate acetyl/butaryl transferase; Belongs to the malic enzymes family.
  
 
 0.452
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.450
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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