STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42131.1Aldolase; Pfam:pfam00682 HMGL-like. (539 aa)    
Predicted Functional Partners:
AKS42129.1
HAD family hydrolase; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase.
 
     0.949
AKS42130.1
Pfam:pfam02348 Cytidylyltransferase.
     0.898
WM2015_91
Pfam:pfam01063 Aminotransferase class IV.
  
 
 0.826
AKS42392.1
Pfam:pfam00180 Isocitrate/isopropylmalate dehydrogenase.
  
 
 0.676
AKS40647.1
Pfam:pfam00180 Isocitrate/isopropylmalate dehydrogenase.
  
 
 0.676
AKS41718.1
Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family.
 
 
 0.649
AKS42132.1
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.649
AKS41945.1
Aminodeoxychorismate lyase; Pfam:pfam01063 Aminotransferase class IV.
  
 
 0.644
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
  
  
 0.623
AKS42455.1
Aspartate kinase; Pfam:pfam00742 Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
  
 0.604
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.