STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42181.1Pfam:pfam07896 Protein of unknown function (DUF1674). (54 aa)    
Predicted Functional Partners:
AKS42178.1
Succinate dehydrogenase; Pfam:pfam00890 FAD binding domain; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
       0.706
AKS42179.1
Pfam:pfam01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
       0.706
AKS42180.1
Pfam:pfam01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
       0.706
AKS42177.1
Succinate dehydrogenase iron-sulfur subunit; Pfam:pfam13085 2Fe-2S iron-sulfur cluster binding domain; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
       0.667
AKS42182.1
Hypothetical protein; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
       0.599
AKS42176.1
Hypothetical protein; Pfam:pfam03937 Flavinator of succinate dehydrogenase.
       0.532
AKS42183.1
Hypothetical protein; Pfam:pfam12974 ABC transporter, phosphonate, periplasmic substrate-binding protein.
       0.490
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.