STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42247.1Pfam:pfam00535 Glycosyl transferase family 2. (297 aa)    
Predicted Functional Partners:
AKS42246.1
Hypothetical protein.
 
 
   0.882
AKS42249.1
Hypothetical protein.
 
 
   0.797
AKS41793.1
Glycosyl transferase family 2; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
  
0.587
AKS40553.1
Hypothetical protein.
  
     0.548
AKS40880.1
Sugar ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
  
 0.537
AKS43002.1
Pfam:pfam04138 GtrA-like protein.
 
  
 0.476
AKS40879.1
Hypothetical protein; Pfam:pfam01061 ABC-2 type transporter.
 
  
 0.415
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.