STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42263.1Pfam:pfam00482 Type II secretion system (T2SS), protein F. (398 aa)    
Predicted Functional Partners:
AKS42262.1
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.980
AKS42261.1
General secretion pathway protein GspD; Pfam:pfam00263 Bacterial type II and III secretion system protein.
 
  
 0.942
AKS42066.1
Protein-L-isoaspartate(D-aspartate) O-methyltransferase; Pfam:pfam00437 Type II/IV secretion system protein.
 
 0.919
AKS42252.1
General secretion pathway protein GspE; Pfam:pfam00437 Type II/IV secretion system protein.
 
 0.919
AKS40865.1
Pfam:pfam00482 Type II secretion system (T2SS), protein F.
  
  
 
0.918
AKS40864.1
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.917
AKS42260.1
Hypothetical protein; Pfam:pfam11356 Type IV pilus biogenesis.
 
  
 0.863
AKS42254.1
Methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.848
AKS40939.1
Pfam:pfam08334 Type II secretion system (T2SS), protein G.
 
  
 0.793
AKS43069.1
Twitching motility protein; Pfam:pfam00437 Type II/IV secretion system protein.
 
  
 0.791
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.