STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42321.1Multidrug ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter. (293 aa)    
Predicted Functional Partners:
AKS42320.1
Pfam:pfam00392 Bacterial regulatory proteins, gntR family.
 
  
 0.957
AKS42322.1
Hypothetical protein.
       0.778
AKS42319.1
Hypothetical protein.
       0.757
AKS42122.1
Pfam:pfam12679 ABC-2 family transporter protein.
  
 
 0.653
AKS42318.1
Membrane protein; Pfam:pfam00254 FKBP-type peptidyl-prolyl cis-trans isomerase.
   
   0.522
AKS42323.1
Diguanylate phosphodiesterase; Pfam:pfam00563 EAL domain.
       0.517
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.469
AKS42317.1
Pfam:pfam09831 Uncharacterized protein conserved in bacteria (DUF2058).
       0.461
ccmA
Cytochrome C biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
  
    0.452
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.449
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.